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MCell: A Monte Carlo Simulator of Cellular Microphysiology

File index of the MCell Tutorial

File index of the MCell Tutorial

Linear Diffusion


Introduction:
This setup introduces the use of checkpointing. Ligands originally diffuse within a central box, then diffuse out when the checkpoint is reached, and are counted by the sampling boxes located outside of the original box.
The MDL file:
linear_diffusion_1.mdl.html
linear_diffusion_2.mdl.html
You may use the following script file to control your simulation:
simu.com.html